Difference between revisions of "Main Page"

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==  description ==
 
==  description ==
 
== Automatic reconstruction with [http://aureme.genouest.org AuReMe] ==
 
== Automatic reconstruction with [http://aureme.genouest.org AuReMe] ==
Model summary: [[MEDIA:summary.txt|summary]]
 
  
Download '''AuReMe''' Input/Output [LINK OR MEDIA data]
 
 
The automatic reconstruction of ''MODEL_NAME'' results to a Genome scale [[MEDIA:model.xml|Model]] containing 3277 reactions, 3652 metabolites, 26748 genes and 1513 pathways. This GeM was obtained based on the following sources:
 
 
* Based on annotation data:
 
* Based on annotation data:
 
** Creation of a metabolic network containing 3277 reactions
 
** Creation of a metabolic network containing 3277 reactions
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[[FILE:venn.png|frameless|border]]
 
[[FILE:venn.png|frameless|border]]
 
== Collaborative curation ==
 
* Suggest reactions to add or remove:
 
** Download this [[MEDIA:Add_delete_reaction.csv|form]]
 
* Suggest new reactions to create and add:
 
** Download this [[MEDIA:Reaction_creator.csv|form]]
 
* '''Follow the examples given in the form(s) to correctly share your suggestions'''
 
* Send the filled form(s) to: CONTACT_MAIL
 

Latest revision as of 11:41, 9 October 2020

description

Automatic reconstruction with AuReMe

  • Based on annotation data:
    • Creation of a metabolic network containing 3277 reactions

Venn.png