https://bbip.genouest.org/index.php?action=history&feed=atom&title=GPPSYN-RXN 2026-04-10T14:35:48Z Revision history for this page on the wiki MediaWiki 1.28.1 https://bbip.genouest.org/sp/brassica_napus/aureme/index.php?title=GPPSYN-RXN&diff=35151&oldid=prev 2020-10-09T11:08:19Z

<p>Created page with &quot;<a href="/sp/brassica_napus/aureme/index.php/Category:Reaction" title="Category:Reaction">Category:reaction</a> == Reaction GPPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.1 ec-2.5.1.1] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <p><b>New page</b></p><div>[[Category:reaction]]<br /> == Reaction GPPSYN-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.5.1.1 ec-2.5.1.1]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-4211]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''=&gt;''' 1 [[GERANYL-PP]][c] '''+''' 1 [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g51100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g20500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng74570D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g32750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g33450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng57390D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g35610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g09680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g18910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g18970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g41820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g02050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng67790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng66570D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g01020D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g35250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g29350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g01820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g01750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g31920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g13910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng37200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g15440D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng18270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g37010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g25720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g39040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g03180D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g24980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * [[PWY-7141]], (3S)-linalool biosynthesis:<br /> ** '''2''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7709]], (3R)-linalool biosynthesis:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7102]], bisabolene biosynthesis (engineered):<br /> ** '''3''' reactions found over '''6''' reactions in the full pathway<br /> * [[PWY-5122]], geranyl diphosphate biosynthesis:<br /> ** '''1''' reactions found over '''1''' reactions in the full pathway<br /> * [[PWY-6383]], mono-trans, poly-cis decaprenyl phosphate biosynthesis:<br /> ** '''2''' reactions found over '''5''' reactions in the full pathway<br /> * [[PWY-7659]], viridicatumtoxin biosynthesis:<br /> ** '''1''' reactions found over '''9''' reactions in the full pathway<br /> * [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis:<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY-7410]], ipsdienol biosynthesis:<br /> ** '''2''' reactions found over '''4''' reactions in the full pathway<br /> * [[PWY-6859]], all-trans-farnesol biosynthesis:<br /> ** '''3''' reactions found over '''4''' reactions in the full pathway<br /> * [[PWY-7182]], linalool biosynthesis I:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7736]], stellatic acid biosynthesis:<br /> ** '''4''' reactions found over '''8''' reactions in the full pathway<br /> &lt;/div&gt;<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR97512<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22408 22408]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01658 R01658]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P08524 P08524]<br /> ** [http://www.uniprot.org/uniprot/P05369 P05369]<br /> ** [http://www.uniprot.org/uniprot/P14324 P14324]<br /> ** [http://www.uniprot.org/uniprot/P46376 P46376]<br /> ** [http://www.uniprot.org/uniprot/Q45220 Q45220]<br /> ** [http://www.uniprot.org/uniprot/P49350 P49350]<br /> ** [http://www.uniprot.org/uniprot/Q50891 Q50891]<br /> ** [http://www.uniprot.org/uniprot/P49349 P49349]<br /> ** [http://www.uniprot.org/uniprot/Q09152 Q09152]<br /> ** [http://www.uniprot.org/uniprot/P49351 P49351]<br /> ** [http://www.uniprot.org/uniprot/P49352 P49352]<br /> ** [http://www.uniprot.org/uniprot/Q43315 Q43315]<br /> ** [http://www.uniprot.org/uniprot/O24241 O24241]<br /> ** [http://www.uniprot.org/uniprot/O24242 O24242]<br /> ** [http://www.uniprot.org/uniprot/Q92334 Q92334]<br /> ** [http://www.uniprot.org/uniprot/Q92218 Q92218]<br /> ** [http://www.uniprot.org/uniprot/Q92235 Q92235]<br /> ** [http://www.uniprot.org/uniprot/Q92250 Q92250]<br /> ** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]<br /> ** [http://www.uniprot.org/uniprot/P49353 P49353]<br /> ** [http://www.uniprot.org/uniprot/O04882 O04882]<br /> ** [http://www.uniprot.org/uniprot/O65004 O65004]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-2.5.1.1}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=29}}<br /> {{#set: nb pathway associated=11}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div>

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