Admin: Created page with "Category:reaction == Reaction FUMHYDR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.2 ec-4.2.1.2] * direction: ** reversible * common-name: ** nil * synonymous..."

2020-10-09T11:02:32Z

Created page with "Category:reaction == Reaction FUMHYDR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.2 ec-4.2.1.2] * direction: ** reversible * common-name: ** nil * synonymous..."

New page

[[Category:reaction]]
== Reaction FUMHYDR-RXN ==
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.2 ec-4.2.1.2]
* direction:
** reversible
* common-name:
** nil
* synonymous:
** fumarate hydration
** malate dehydration
== Reaction formula ==
* 1 [[MAL]][c] '''<=>''' 1 [[FUM]][c] '''+''' 1 [[WATER]][c]
== Gene(s) associated with this reaction ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* Gene: [[BnaCnng54500D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaCnng54490D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51240D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51220D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaA05g00450D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaA05g00440D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51800D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51790D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51910D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51890D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaC04g51900D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaA04g27030D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaA04g27040D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaAnng12720D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[BnaAnng12700D]]
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
</div>
== Pathway(s) ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* [[P23-PWY]], reductive TCA cycle I:
** '''8''' reactions found over '''12''' reactions in the full pathway
* [[P42-PWY]], incomplete reductive TCA cycle:
** '''4''' reactions found over '''7''' reactions in the full pathway
* [[PWY-5392]], reductive TCA cycle II:
** '''5''' reactions found over '''12''' reactions in the full pathway
* [[TCA]], TCA cycle I (prokaryotic):
** '''8''' reactions found over '''10''' reactions in the full pathway
* [[PWY-8086]], (S)-lactate fermentation to propanoate, acetate and hydrogen:
** '''5''' reactions found over '''13''' reactions in the full pathway
* [[PWY-7254]], TCA cycle VII (acetate-producers):
** '''6''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5690]], TCA cycle II (plants and fungi):
** '''8''' reactions found over '''9''' reactions in the full pathway
* [[PWY66-398]], TCA cycle III (animals):
** '''9''' reactions found over '''10''' reactions in the full pathway
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
** '''7''' reactions found over '''8''' reactions in the full pathway
* [[REDCITCYC]], TCA cycle VI (Helicobacter):
** '''5''' reactions found over '''9''' reactions in the full pathway
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
** '''10''' reactions found over '''12''' reactions in the full pathway
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
** '''9''' reactions found over '''11''' reactions in the full pathway
* [[P108-PWY]], pyruvate fermentation to propanoate I:
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
** '''5''' reactions found over '''10''' reactions in the full pathway
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation:
** '''6''' reactions found over '''4''' reactions in the full pathway
* [[PWY-6728]], methylaspartate cycle:
** '''10''' reactions found over '''19''' reactions in the full pathway
* [[FERMENTATION-PWY]], mixed acid fermentation:
** '''10''' reactions found over '''16''' reactions in the full pathway
</div>
== Reconstruction information ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
== External links ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* METANETX-RXN : MNXR99705
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12463 12463]
* PIR:
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A47692 A47692]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49760 A49760]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64377 A64377]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A81281 A81281]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A81807 A81807]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B44511 B44511]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B81862 B81862]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64461 E64461]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64685 E64685]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70896 H70896]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H71462 H71462]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4293 JC4293]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4982 JC4982]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PA0062 PA0062]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40448 S40448]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76348 S76348]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T00433 T00433]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07374 T07374]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T41265 T41265]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T43727 T43727]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45269 T45269]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFBSC8 UFBSC8]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFBYM UFBYM]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFEC UFEC]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFECAQ UFECAQ]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFHUM UFHUM]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFPG UFPG]
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=UFRT UFRT]
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q04718 Q04718]
** [http://www.uniprot.org/uniprot/Q58034 Q58034]
** [http://www.uniprot.org/uniprot/O69294 O69294]
** [http://www.uniprot.org/uniprot/Q9JTE3 Q9JTE3]
** [http://www.uniprot.org/uniprot/P14407 P14407]
** [http://www.uniprot.org/uniprot/Q9JTR0 Q9JTR0]
** [http://www.uniprot.org/uniprot/Q58690 Q58690]
** [http://www.uniprot.org/uniprot/O25883 O25883]
** [http://www.uniprot.org/uniprot/O53446 O53446]
** [http://www.uniprot.org/uniprot/O84863 O84863]
** [http://www.uniprot.org/uniprot/Q51404 Q51404]
** [http://www.uniprot.org/uniprot/Q7M4Z3 Q7M4Z3]
** [http://www.uniprot.org/uniprot/P39461 P39461]
** [http://www.uniprot.org/uniprot/Q55674 Q55674]
** [http://www.uniprot.org/uniprot/P93033 P93033]
** [http://www.uniprot.org/uniprot/Q43180 Q43180]
** [http://www.uniprot.org/uniprot/O94552 O94552]
** [http://www.uniprot.org/uniprot/O66271 O66271]
** [http://www.uniprot.org/uniprot/Q60022 Q60022]
** [http://www.uniprot.org/uniprot/P07343 P07343]
** [http://www.uniprot.org/uniprot/P08417 P08417]
** [http://www.uniprot.org/uniprot/P05042 P05042]
** [http://www.uniprot.org/uniprot/P0AC33 P0AC33]
** [http://www.uniprot.org/uniprot/P10173 P10173]
** [http://www.uniprot.org/uniprot/P14408 P14408]
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01082 R01082]
</div>
{{#set: ec-number=ec-4.2.1.2}}
{{#set: direction=reversible}}
{{#set: common-name=nil}}
{{#set: synonymous=fumarate hydration|malate dehydration}}
{{#set: nb gene associated=15}}
{{#set: nb pathway associated=17}}
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}

FUMHYDR-RXN - Revision history

Admin: Created page with "Category:reaction == Reaction FUMHYDR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.2 ec-4.2.1.2] * direction: ** reversible * common-name: ** nil * synonymous..."